rs9662124 chr1:226703512 T>C
- Sequence
tgtcgctgcccggcccccacctcc[T/C]ctctcctcccgcgcgcgctctgcc
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) SUM159PT (Triple negative breast cancer) breast tumor
- ASB for transcription factors
- TYY1_HUMAN RBM25_HUMAN ESR1_HUMAN BRD2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.17 | 1.71 | 3.33 | n/a | No Hit | |||
| RBM25_HUMAN | n/a | 2.24 | 3.00 | n/a | n/a | |||
| ESR1_HUMAN | 1.71 | 0.26 | 2.44 | n/a | No Hit | |||
| BRD2_HUMAN | 0.38 | 1.63 | 2.44 | n/a | n/a | |||
| SMAD2_HUMAN | -0.52 | 2.21 | 2.00 | n/a | No Hit |
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