rs9668670 chr12:52884728 T>A
- Sequence
gacactatttggttatttctaatc[T/A]tttacaggaaaaggaggaagtcac
- ASB in cell types
- HepG2 (hepatoblastoma) GM19193 (female B-cells Lymphoblastoid Cell Lines) iPS-derived dermal fibroblasts liver
- ASB for transcription factors
- TBX3_HUMAN FOXA2_HUMAN CEBPA_HUMAN P66A_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | -3.38 | 3.52 | 1.00 | n/a | No Hit | |||
| FOXA2_HUMAN | n/a | 2.86 | 1.25 | 3.98 | Concordant | |||
| CEBPA_HUMAN | n/a | 2.99 | 1.50 | n/a | No Hit | |||
| P66A_HUMAN | -3.08 | 2.96 | 1.00 | n/a | n/a | |||
| ARI4B_HUMAN | -2.92 | 2.81 | 1.00 | n/a | n/a |
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Motif analysis
