rs9672349 chr15:27359056 G>C
- Sequence
cctgcactgcaggctccttttatg[G/C]acaagttttgggggtgaagctgca
- ASB in cell types
- A549 (lung carcinoma) FT282 (normal human fallopian tube tissue) foreskin keratinocyte K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.93 | 1.48 | n/a | No Hit | |||
| SMC3_HUMAN | 2.01 | 0.02 | 2.90 | n/a | n/a |
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