rs967591 chr19:45406676 G>A
- Sequence
gcgagcagcccgggctacagggtt[G/A]cctgaggtgtgggtcccaggatgg
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) breast tumor HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN INT11_HUMAN MAX_HUMAN E2F1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.05 | 0.34 | 1.67 | n/a | No Hit | |||
| INT11_HUMAN | 1.63 | -0.92 | 1.50 | n/a | n/a | |||
| MAX_HUMAN | 0.99 | 0.09 | 1.08 | n/a | No Hit | |||
| E2F1_HUMAN | 2.51 | -4.74 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid