rs9676859 chr19:57614181 C>T
- Sequence
cctgtgcgccgcccggcggcggca[C/T]tcttaggggcgtctccctgcggac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TF65_HUMAN TEAD1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.92 | n/a | 3.00 | n/a | No Hit | |||
| TEAD1_HUMAN | n/a | 2.49 | 1.00 | 5.08 | Concordant |
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Motif analysis
