rs9678017 chr2:121531080 A>G
- Sequence
taaataaactagtactttgtggtt[A/G]aaccagtagagggtgcacaagacg
- ASB in cell types
- CD14+ monocytes HeLa (cervical adenocarcinoma) neutrophils from periferal blood 22RV1 (prostate carcinoma)
- ASB for transcription factors
- STAT1_HUMAN CTCF_HUMAN GCR_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.70 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.81 | 0.61 | 1.34 | 0.00 | Weak Discordant | |||
| GCR_HUMAN | 0.83 | 0.60 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.80 | 0.10 | 1.67 | n/a | No Hit | |||
| INT11_HUMAN | 0.17 | 1.59 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 7
Motif analysis
