rs968402 chr2:233868105 G>A

Sequence
cctggccaatctacgattttcact[G/A]ggctcacgaagcacatgatcttcg
ASB in cell types
A549 (lung carcinoma) HT1080 (fibrosarcoma)
ASB for transcription factors
SSRP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSRP1_HUMAN 2.09 -1.24 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  hypertension (early onset hypertension),  ldl cholesterol change with statins,  parkinsons disease,  partial epilepsy,  variant creutzfeldt-jakob disease
GTEx eQTL Brain_Caudate_basal_ganglia,  Esophagus_Mucosa,  Prostate,  Testis,  Thyroid

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