rs968479 chr20:48723090 A>G

Sequence
tgaggagtcgagatagaatgttcc[A/G]gctattcttaggcaacgttcaagt
ASB in cell types
MCF7 WS8 cells MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.38 1.49 1.002.1·10-5 3.87 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  hypertension (early onset hypertension),  neuroblastoma (brain cancer),  stabilized warfarin dose,  systolic blood pressure (sbp)
GTEx eQTL Esophagus_Muscularis,  Testis

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