rs9692271 chr7:155297238 G>C
- Sequence
acaggatggaggcgcgctcccttg[G/C]aggctgtggtctcgattttatctg
- ASB in cell types
- K562 (myelogenous leukemia) GM12891 (male B- cells lymphoblastoid cell line) GM8330-8-derived NPC foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN CHD8_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.12 | 0.24 | 1.43 | n/a | No Hit | |||
| STAG1_HUMAN | 1.98 | 0.09 | 1.00 | n/a | n/a | |||
| CHD8_HUMAN | 2.33 | -0.28 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Liver, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood