rs969416 chr6:22717682 A>G
- Sequence
agaatgatagaaaagactcttacc[A/G]tataaggcaatggtttaaaaccat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | 3.04 | -3.30 | 1.00 | -7.92 | Concordant |
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Motif analysis
Genetic associations
GRASP aortic valve calcium, eye color, primary rhegmatogenous retinal detachment, simpson-angus scale, stabilized warfarin dose