rs971363 chr18:11980461 T>G

Sequence
ccgtctccaaattcgagttttggg[T/G]gtgaagagtttataaagtccagcc
ASB in cell types
22RV1 (prostate carcinoma) HepG2 (hepatoblastoma)
ASB for transcription factors
ANDR_HUMAN RFOX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.61 -4.87 8.8·10-41.00 2.00 n/a No Hit
RFOX2_HUMAN 1.63 -1.70 0.031.00 1.17 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Breast_Mammary_Tissue,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Whole_Blood

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