rs971406 chr20:58540390 G>A

Sequence
attacccactggtgggacattatg[G/A]ttttcttttacaactagctcgttt
ASB in cell types
MS-1 (Small cell lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MS-1 (Small cell lung carcinoma) -0.91 1.67 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  hypertension (early onset hypertension),  ldl cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts

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