rs971535 chr11:23123974 C>T

Sequence
taagcatcttgggtcacatagtta[C/T]tttacagaggacgattgccctgct
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.35 0.10 1.0·10-31.00 1.00 n/a n/a
SMRC1_HUMAN 1.29 -0.62 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  homa-ir

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