rs972059 chr9:68779949 G>A
- Sequence
ggactagcggcccgaccactcctc[G/A]cccctcccctaccactgccgcgca
- ASB in cell types
- monocytes from periferal blood GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ZFX_HUMAN SRBP2_HUMAN MNT_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -0.69 | 1.58 | 1.50 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.87 | 0.01 | 2.75 | 3.42 | Discordant | |||
| MNT_HUMAN | 2.09 | -0.29 | 1.17 | n/a | No Hit | |||
| STAG1_HUMAN | -0.19 | 0.54 | 1.19 | n/a | n/a |
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Motif analysis
