rs9722693 chr9:89782130 G>A
- Sequence
agtcacagcctgggagagttgggt[G/A]gcacagacaattctcgagttttga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN MEF2B_HUMAN IKZF2_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.35 | 1.75 | 1.46 | n/a | No Hit | |||
| MEF2B_HUMAN | -2.48 | 2.73 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.29 | 1.63 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | -2.15 | 2.42 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), ldl cholesterol, obesity with early age of onset (age >2), total cholesterol