rs973078 chr5:149993940 G>A

Sequence
ttaaaaacaaacaaacaaacaaac[G/A]aacgaacaaacagaagtcttgtag
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.54 n/a 0.041.00 2.00 3.26 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP hdl cholesterol,  infant head circumference,  parkinsons disease,  total cholesterol
GTEx eQTL Nerve_Tibial

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