rs9747062 chr17:8119739 A>C
- Sequence
cagtaatgtacacaatcttgaaag[A/C]caccacgagggaggttccatggtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) IMR90 (lung fibroblasts) primary human epidermal keratinocytes
- ASB for transcription factors
- HIRA_HUMAN BRD4_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HIRA_HUMAN | 1.36 | -0.17 | 1.14 | n/a | n/a | |||
| BRD4_HUMAN | 1.23 | 1.02 | 1.83 | n/a | n/a | |||
| FOXK2_HUMAN | n/a | 2.75 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Nerve_Tibial, Testis, Thyroid