rs9762579 chr4:164956838 G>T
- Sequence
ctcacagaacacaaggctctcaag[G/T]ggcttcagcaccccaagcactgca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary human epidermal keratinocytes
- ASB for transcription factors
- MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 1.90 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, infant head circumference, prop taste detection threshold, refractive error, total cholesterol, variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Testis, Thyroid