rs977700 chr8:116935435 A>G

Sequence
tgaagacgcttacacaatagtagg[A/G]aagagtccacatggagaggaactg
ASB in cell types
MDM(monocyte derived macrophages) macrophages form periferal blood
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.54 2.46 1.008.4·10-7 2.00 4.21 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP irritible bowel syndrome,  lp-pla2 activity,  major depressive disorder,  obesity with early age of onset (age >2)
GTEx eQTL Brain_Cortex,  Esophagus_Mucosa,  Testis,  Thyroid

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