rs978248 chr1:47555542 C>T

Sequence
ccctgagatgccactcctattgtg[C/T]aaacagaggtgggaggcccaggta
ASB in cell types
HEK293 (embryonic kidney) CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
KLF17_HUMAN FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KLF17_HUMAN -5.36 3.18 1.000.02 2.00 n/a No Hit
FOXA2_HUMAN -1.59 2.03 1.000.02 1.50 2.44 Concordant
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Motif analysis

FOXA2_HUMAN Concordant
FOXA2_HUMAN pic

Genetic associations

GRASP infant head circumference

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