rs9785013 chr7:92044988 G>A

Sequence
caaaaatattaaacattttaatca[G/A]tgcttctttatctatacaggtatg
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.10 -0.01 1.2·10-61.00 1.66 -3.35 Concordant
FOXA1_HUMAN 1.41 0.04 0.020.96 1.62 n/a No Hit
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellum,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Whole_Blood

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