rs978704 chr15:99371600 T>C

Sequence
ccttacccttgctttttgtggcta[T/C]tgcttctttgaagccaagtaatat
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.69 1.31 1.006.8·10-3 1.10 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid,  premature ovarian failure
GTEx eQTL Colon_Sigmoid,  Whole_Blood

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