rs9789707 chr2:174547384 G>C
- Sequence
tgctttgagcctggaacaaatcat[G/C]gtagtaaaatggcggcagagagct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAF9B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAF9B_HUMAN | -1.99 | 2.39 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, refractive error, systolic blood pressure (sbp), total cholesterol change with statins, triglycerides change with statins
GTEx eQTL Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Lung, Nerve_Tibial, Testis, Thyroid, Whole_Blood