rs979165 chr7:25846858 T>G

Sequence
acaccatggagagtgcaagcccgt[T/G]gtgctggcctcaacccaaggagtg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) ZR-75-1 (invasive ductal carcinoma)
ASB for transcription factors
NOTC1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NOTC1_HUMAN 1.97 n/a 1.0·10-51.00 2.00 n/a n/a
TF65_HUMAN 2.23 1.08 2.5·10-30.66 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  triglycerides,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial

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