rs9792899 chr1:232163679 C>A
- Sequence
agattttatgttatgtacatattg[C/A]cacaatttttaaaattgttggacc
- ASB in cell types
- MCF7 WS8 cells MDA-MB-134 (invasive lobular breast carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.21 | 2.19 | 2.04 | 4.72 | Concordant | |||
| ESR1_HUMAN | -0.31 | 1.77 | 1.91 | n/a | No Hit |
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Motif analysis
