rs9793987 chr1:160692603 G>A
- Sequence
taggaatgcccccagcaccacagg[G/A]cagggagccataccctcagccgcc
- ASB in cell types
- HCT-116 (colon carcinoma) GM23338 transverse colon
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.46 | 0.29 | 1.36 | -2.30 | Concordant | |||
| STAG1_HUMAN | 0.93 | -0.07 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
