rs979586 chr21:15682416 C>T

Sequence
actaccacttcctccctggactta[C/T]gcaatatcctgaatgatctcccta
ASB in cell types
macrophages form periferal blood HEE (human epididymis epithelial cells)
ASB for transcription factors
CEBPB_HUMAN CEBPA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 1.61 0.37 0.031.00 1.79 -0.66 Weak Concordant
CEBPA_HUMAN 0.11 1.11 1.000.03 1.14 -0.25 Weak Discordant
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Motif analysis

CEBPB_HUMAN Weak Concordant
CEBPB_HUMAN pic

Genetic associations

GRASP bipolar disorder,  hip bone mineral density (bmd),  irritible bowel syndrome

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