rs979607 chr17:38868066 T>C

Sequence
tagttcgtacttgactatgaaaac[T/C]aggagaagtaatccaaattcagag
ASB in cell types
HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) 0.08 0.94 1.003.9·10-4 1.72
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  hdl cholesterol,  infant head circumference,  irritible bowel syndrome,  rheumatoid arthritis,  sporadic creutzfeldt-jakob disease
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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