rs9799289 chr3:9848776 A>G

Sequence
caaaacaggcacacaaggattaat[A/G]tgaaatttataatcgtagtacttc
ASB in cell types
GM19238 (female B-cells lymphoblastoid cell lines) GM18526 (B – cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.17 0.41 1.4·10-51.00 1.41 n/a No Hit
STAG1_HUMAN 2.06 0.09 1.8·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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