rs9800473 chr6:36557479 A>G

Sequence
tgatttctgaagaaaggagattgc[A/G]ggccttgagctgtggcccacgcct
ASB in cell types
MDM(monocyte derived macrophages) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.50 n/a 0.011.00 3.00 -0.66 Weak Concordant
SPI1_HUMAN 1.44 2.81 1.000.05 1.92 n/a No Hit
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Motif analysis

STAT1_HUMAN Weak Concordant
STAT1_HUMAN pic

Genetic associations

GRASP microalbuminuria,  rheumatoid arthritis
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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