rs9806220 chr15:65832994 T>G
- Sequence
acccagctgctccttcaagtggtt[T/G]ccaagctccttggccctgtgcatg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line) breast tumor
- ASB for transcription factors
- RFX1_HUMAN FOXA1_HUMAN TLE3_HUMAN ZN687_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -0.24 | 2.67 | 2.88 | 4.84 | Concordant | |||
| FOXA1_HUMAN | 0.29 | 0.81 | 1.45 | n/a | No Hit | |||
| TLE3_HUMAN | -2.24 | 2.36 | 1.00 | n/a | n/a | |||
| ZN687_HUMAN | -0.13 | 1.97 | 1.25 | n/a | n/a | |||
| IKZF2_HUMAN | -0.39 | 1.79 | 1.00 | n/a | n/a |
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Motif analysis
