rs9806544 chr15:63036161 G>A
- Sequence
cctagagcctgagtgggttgtagc[G/A]agacctcaagtagaggagaggcac
- ASB in cell types
- HUES64 (embryonic stem cells) GM23338 GM12890 (Lymphoblastoid Cell Lines) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.45 | 2.12 | 1.27 | n/a | No Hit | |||
| RAD21_HUMAN | -1.96 | 2.80 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Muscle_Skeletal, Stomach, Thyroid