rs9809116 chr3:72348128 A>G
- Sequence
ccgtgccaaccccggcctcctgtg[A/G]gcaacaggaaggggaggtcgcgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Th1-cells HUVEC-C (HUVEC, umbilical vein endothelial cells) GM02630 (Fanconi anemi)
- ASB for transcription factors
- IKZF1_HUMAN BHE40_HUMAN TBX21_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.19 | -1.97 | 1.00 | n/a | n/a | |||
| BHE40_HUMAN | 1.08 | n/a | 1.50 | n/a | No Hit | |||
| TBX21_HUMAN | 3.39 | -3.73 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 3.31 | -3.30 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.27 | -1.94 | 1.00 | n/a | No Hit |
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Motif analysis
