rs9811216 chr3:169769713 T>C
- Sequence
ctggacgcaccgtgctcctcatgt[T/C]accgcccgctattgcttctcgcag
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) adult erythroblasts GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- RBBP5_HUMAN GCR_HUMAN GLIS2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | 2.88 | -5.39 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 1.60 | -0.10 | 1.11 | n/a | No Hit | |||
| GLIS2_HUMAN | 1.61 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Nerve_Tibial, Testis, Thyroid