rs9812693 chr3:13414416 C>T

Sequence
gcgggcctggtgaagggagttgag[C/T]aaggcccggtccagccctgcaggg
ASB in cell types
breast tumor naive IgD+ B cells CD14+ monocytes
ASB for transcription factors
ESR1_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.66 -1.87 0.011.00 2.00 n/a No Hit
STAT1_HUMAN 2.11 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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