rs981940 chr4:39639706 G>A
- Sequence
gaggtggaagaatcgcttgaaccc[G/A]ggaggcggaggttgcagtgagccg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.71 | 0.13 | 2.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 1.94 | -1.71 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg