rs9820422 chr3:151346475 T>C

Sequence
cctcttactttaaccgcttgtttc[T/C]tagctttgtgccctgccacttaga
ASB in cell types
MDM(monocyte derived macrophages) CD14+ monocytes
ASB for transcription factors
SPI1_HUMAN STAT1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 0.92 2.51 1.005.0·10-4 1.86 n/a No Hit
STAT1_HUMAN -4.69 2.78 1.006.9·10-3 3.00 1.90 Weak Concordant
TF65_HUMAN n/a 3.14 1.000.01 3.00 n/a No Hit
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Motif analysis

STAT1_HUMAN Weak Concordant
STAT1_HUMAN pic

Genetic associations

GRASP bipolar disorder diabetic retinopathy in type 2 diabetes mellitus major depressive disorder triglycerides
GTEx eQTL Esophagus_Mucosa Small_Intestine_Terminal_Ileum Spleen Testis Whole_Blood

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