rs982655 chr7:123727639 C>T

Sequence
cagaaagtgattgcaaagggtgga[C/T]gaagataggagagaggcaggaatt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN ENL_HUMAN EWS_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.22 -2.34 0.011.00 1.75 n/a n/a
ENL_HUMAN 1.94 -1.05 0.031.00 1.50 n/a n/a
EWS_HUMAN 2.59 -2.46 0.051.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  birth weight,  irritible bowel syndrome,  years of education
GTEx eQTL Artery_Aorta,  Heart_Atrial_Appendage,  Lung,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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