rs982697 chr16:58500028 A>C

Sequence
caggcttgtctcccagcagccaat[A/C]tgggagctggggctcctggtaagc
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
NFYC_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFYC_HUMAN n/a 3.96 1.008.5·10-6 2.00 1.47 Weak Concordant
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Motif analysis

NFYC_HUMAN Weak Concordant
NFYC_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Artery_Aorta,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Whole_Blood

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