rs9827460 chr3:134030326 T>G
- Sequence
ggcaggaaggctgggatatgaggg[T/G]gcccgaggcgggcgctggaggggc
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) breast tumor xenograft
- ASB for transcription factors
- ZFHX2_HUMAN GCR_HUMAN ZBT26_HUMAN ZN398_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | 1.50 | n/a | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 2.51 | -2.35 | 1.00 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.08 | -1.81 | 1.00 | n/a | No Hit | |||
| ZN398_HUMAN | 2.16 | n/a | 3.00 | n/a | n/a | |||
| PATZ1_HUMAN | 2.42 | -2.08 | 1.00 | 3.71 | Discordant |
Items per page:
1 – 5 of 6
Motif analysis
