rs9828406 chr3:185421821 G>A

Sequence
tgtgcagtggcagcgtgtgggtgt[G/A]catacaaacacaggtaaaacttag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.46 0.92 0.825.0·10-3 1.01
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose height ldl cholesterol recurrent early onset major depressive disorder recurrent early onset major depressive disorder (females) total cholesterol urinary albumin-to-creatinine ratio waist hip ratio
GTEx eQTL Adipose_Subcutaneous

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