rs9829555 chr3:172691357 T>C

Sequence
tgttgcattatcattatgagcttc[T/C]agatctctccttcatttttgttcc
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma) T47D (invasive ductal carcinoma)
ASB for transcription factors
FOXA2_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 0.02 1.76 1.001.5·10-4 1.05 n/a No Hit
FOXA1_HUMAN 1.45 0.77 9.0·10-31.00 2.67 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL Esophagus_Mucosa

Download