rs9834312 chr3:58096982 G>A

Sequence
ggcctcaggctctttgtcttggca[G/A]cctttcgagttctgtttgagatga
ASB in cell types
breast tumor
ASB for transcription factors
GATA3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN n/a 3.06 1.006.9·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia,  height,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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