ADASTRA v6.1.1
Search
Browse
Annotate
Help
Downloads
About
rs9835230
chr3:190017672
G
>
A
Sequence
gtattatgcatgtgccgagttgct[G/A]agtatggctgatgctgcagccctt
ASB in cell types
2588 (Lymphoblastoid Cell Lines)
foreskin keratinocyte
GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
0.11
1.60
1.00
5.0·10
-3
1.12
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
biploar disorder (bipolar schizoaffective disorder)
,
irritible bowel syndrome
,
ldl cholesterol
,
lp-pla2 mass
,
total cholesterol
,
triglycerides change with statins
GTEx eQTL
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
Download
Download page in JSON
Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)