rs9835230 chr3:190017672 G>A

Sequence
gtattatgcatgtgccgagttgct[G/A]agtatggctgatgctgcagccctt
ASB in cell types
2588 (Lymphoblastoid Cell Lines) foreskin keratinocyte GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.11 1.60 1.005.0·10-3 1.12 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium biploar disorder (bipolar schizoaffective disorder) irritible bowel syndrome ldl cholesterol lp-pla2 mass total cholesterol triglycerides change with statins
GTEx eQTL Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic

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