rs9836450 chr3:15310970 G>C

Sequence
acatgaagcacacaggatgagtca[G/C]tgttttctggccaatcgctcacct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.05 -0.13 2.2·10-31.00 1.00 n/a n/a
IKZF1_HUMAN 1.89 -0.47 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal

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