rs9837918 chr3:58103110 C>T
- Sequence
ccaacaggctggggcaggagcatt[C/T]tgagctccagaaagttaatatttg
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- NC2A_HUMAN ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NC2A_HUMAN | -2.52 | 2.84 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 3.03 | -5.54 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.67 | -0.82 | 2.00 | -0.73 | Weak Concordant |
Items per page:
1 – 3 of 3
Motif analysis
