rs9839697 chr3:10376599 T>C
- Sequence
tcccccatctgctacaggtgctac[T/C]gcaggtgctgcggagactgctcac
- ASB in cell types
- ICN12 (primary pre-B acute lymphomablastic leukemia) RPMI8226 (Plasma cell myeloma) GEN2.2 (blastic plasmacytoid dendritic cell neoplasm)
- ASB for transcription factors
- PBX1_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX1_HUMAN | 3.09 | n/a | 1.33 | n/a | No Hit | |||
| ITF2_HUMAN | 2.17 | -0.16 | 1.00 | -0.65 | Weak Concordant |
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Motif analysis
