rs9844422 chr3:194089712 C>T
- Sequence
aaacagatgagtaatcagacattc[C/T]gggagccctcgttaagcccattgc
- ASB in cell types
- HepG2 (hepatoblastoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) iPS-derived dermal fibroblasts CD14+ monocytes
- ASB for transcription factors
- RARA_HUMAN TF65_HUMAN STAT1_HUMAN TBX3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.82 | -0.58 | 1.17 | n/a | No Hit | |||
| TF65_HUMAN | 2.33 | -1.01 | 2.25 | n/a | No Hit | |||
| STAT1_HUMAN | 2.56 | 0.24 | 2.00 | n/a | No Hit | |||
| TBX3_HUMAN | 2.04 | -1.98 | 1.00 | n/a | No Hit | |||
| TEAD3_HUMAN | 2.86 | -2.52 | 1.00 | -1.61 | Weak Concordant |
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Motif analysis
