rs984494 chr2:44955829 T>C

Sequence
acctcgcggcgatggtgcatagca[T/C]gcgaaccctccgcaccgcgggcct
ASB in cell types
HepG2 (hepatoblastoma) GBM39 (Human brain tumor) Peyer's patch HCT-116 (colon carcinoma)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.10 0.39 1.000.02 1.10 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellum

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