rs9845190 chr3:27051646 G>C
- Sequence
gaatattaataattgataaccctg[G/C]ggaaggaatgctttcccaggggta
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- SUMO2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SUMO2_HUMAN | 1.94 | -1.59 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Colon_Sigmoid, Heart_Left_Ventricle, Testis